Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence --------MSLLTDPPSLGTAQAASVIAAAVRLLTKRTGAEVTLVEVEDL-----GGTGQTLVVRARVGEN---PFSLPRTLVIKQTPPQGSREMFTREVVSYQFTTSLATGDRPGPELLAWDSEERVLIISDLGEATPMSQVLASQSGGEENALMAWAQRLGRMHAATAGREIDFAALLRRAKVPPSRDIIGQQVQGAVLALPRQLREQLSLET----------PEEVRAIAAKAKELFDKGTM-RAFSPADPGPDNILLTADQGVRFLDYEWGGFRDATLDIAYALV---------TYRGAMRKEES---KEYWSELDQRIVQAWRAEAVAVWPALADDVTLQKRVLGAMLIWVWLTTAWWLPGHGRDGAWSHRHSLSTPTPQALMARWEGLLGLANAAGDLAVAEHAETVIAALRAAWRW 1NW1 Chain:A ((32-426)) GMKELLSTMDLDTDANTI-----PELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHL----GPKLYGIFSG---GRLEEYIPSRPLSCHEIS----LAHMSTKIAKRVAKVHQLEVP-------------IWKEPDYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLP--KRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYK--KSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNLA-------------------------

General information: TITO was launched using: RESULT: Template: 1NW1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1475 5285 3.58 16.21 target 2D structure prediction score : 0.69 Monomeric hydrophicity matching model chain A : 0.64 3D Compatibility (PKB) : 3.58 2D Compatibility (Sec. Struct. Predict.) : 0.69 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.355

(partial model without unconserved sides chains): PDB file : Tito_1NW1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1nw1-query.scw PDB file : Tito_Scwrl_1NW1.pdb: