Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSFILVFLYALIYRNGGCRLLDKWLKAELEKKIGAIQHMSLLDEQGGTSTVRKIVTSQGAFLLKSSSRQRYREWLRREALVLQKLTETHRLPVPVYYGFIQQQHSSHIVMSFEDGITLTSALRKAKGDTEKKKLIKSFGQFLNRLHETELVPDLQP-EIDWL-D---LQIKRAGEYV----EKGQAEGSAGLLKELDQHRPVPVQQTMIHGDCTTDNVLVKDG--EVCLFIDAAGISAGDPRYDESLAIRNFA------TNEAFLNAFYEGYCRYR---VSKQEFEYFNGGLYEFF
4H05 Chain:B ((18-266))---------------------------------------VVVE-DGASGAGVYRLRGGGRELFVKVAALG-AGVGLLGEAERLVWLA-EVGIPVPRVVEGGGDERVAWLVTEAVPGRPASARWP----REQRLDVAVALAGLARSLHALDWERCPFDRSLAVTVPQAARAVAEGSVDLEDLDEERKGWSGERLLAELERTRPADEDLAVCHGDLCPDNVLLDPRTCEVTGLIDVGRVGRADRHSDLALVLRELAHEEDPWFGPECSAAFLREYGRGWDGAVSEEKLAFYRL-LDEF-


General information:
TITO was launched using:
RESULT:

Template: 4H05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1029 -51419 -49.97 -224.53
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -49.97
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.371

(partial model without unconserved sides chains):
PDB file : Tito_4H05.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4h05-query.scw
PDB file : Tito_Scwrl_4H05.pdb: