Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceKLCKWTVLNSEGEIIDSGSCLNTEYMKHGDIHVEFENDCTPIIFGADRVAEKVTIKG
5Y97 Chain:C ((45-93))---KWT-FHSDGTVRSLGKCLATNNSKFGNLVVIY--DCSKL--AAEDISWDVSVGG


General information:
TITO was launched using:
RESULT:

Template: 5Y97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 136 -14414 -105.98 -294.15
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.75

3D Compatibility (PKB) : -105.98
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.210

(partial model without unconserved sides chains):
PDB file : Tito_5Y97.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5y97-query.scw
PDB file : Tito_Scwrl_5Y97.pdb: