Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAAVLPQLCKVEMFDKNARFVGMARGNWDKD----FVIKGHTIKCNTRCETKDVVLPKNWSVKG
5DVW Chain:A ((78-120))------------SDKGGSFEAALWQQWDRQSLIMFITAFLNIALQLPCESSAVVV--------


General information:
TITO was launched using:
RESULT:

Template: 5DVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 25 -2719 -108.74 -69.71
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -108.74
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.152

(partial model without unconserved sides chains):
PDB file : Tito_5DVW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5dvw-query.scw
PDB file : Tito_Scwrl_5DVW.pdb: