Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAACPELVDATFAILASGWHSTAVEVGGRWVFKFPRGAEAEAALLREAAVLRLVRPAVSLPVPAPQVFAGPP------LFSRHEKLPGGYLLGEDYRRLDEPARQAVGDALGRFYAELHRLPPARMRAVGALPVRPWESPAAMRRRALPLLPAAWRERAERLVREYAKLPADPLGS--IFGFF------DGHGWNMAFDSEAGRLNGVYDFADAGIGPLHQEFIYSAFIDADLTERIVAAYERFSGRRLERRRIALLTAAHRLSELAELADEPRHLPDMLAGALDGLALAEAQGLA
4DFB Chain:A ((39-254))----PDFTINTIEISGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEV-VFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFR--EKINEDNKKIKKLLSRELKGPQMKKVDDFYR---DILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFI------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 687 7161 10.42 35.81
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 10.42
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.282

(partial model without unconserved sides chains):
PDB file : Tito_4DFB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dfb-query.scw
PDB file : Tito_Scwrl_4DFB.pdb: