Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceQIGKWVLSKEQIDALFFYQCQVTIHYPGAERGKLLKYLAEPREPIPLPKFQGKLYYAISDSGCKYREYSKGDPWPKGL
1NVV Chain:S ((452-476))---------------------------------------EPRNPKPLPRFPKKYSYPLKSPGVR--------------


General information:
TITO was launched using:
RESULT:

Template: 1NVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 7 1499 214.14 59.96
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain S : 0.60

3D Compatibility (PKB) : 214.14
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.177

(partial model without unconserved sides chains):
PDB file : Tito_1NVV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1nvv-query.scw
PDB file : Tito_Scwrl_1NVV.pdb: