Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAHVPSGPDELTPEWLSRALGAEVTSVSWERVGSGQIGACYRLTLKGEEKVPARLVAKMASEDPTTRAFLASAYRTEVLFYRDVVPTVAVRTPRCHYQAIADDNSAFVLLLEDMAPAEQGDQLAGCTPQQAAAAVTNLAGLHGPRWCDKTLTEIPWLSVVTEDDAAVLTEVFAPAVDAFVQRFTGRLSDEDIDTLRRVADRIAAWAVARPERFGLVHGDYRLDNLLFAPPPQQTVTAV-DWQTLSIGHPVRDLSFFLGTAMDPAERSAHERALVETYHTALTGYGVDDYDLQSCWEDYRFGALQGPLITVLGCAVGTPTERGDRMFLAMTRRSCAAIRELGSLELI
3HAM Chain:A ((1-299))MVNLDAEIYEHLNKQI---------KINELRYLSSGDDSDTFLCNEQYVVKVPK-----------------RDSVRISQKREFELYRFLENCKLSYQIPAVVYQSDRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEI-DCSVSLFSDALVNKKDKFLQDKKLLISILEK-EQLLTDEMLEHIETIYENILNNAVLFKYTPCLVHNDFSANNMIFR---NNRLFGVIDFGDFNVGDPDNDFLCLL-DCSTDDFGKEFGRKVLKYYQHKA---------PEVAERKAELNDVYWSIDQIIYGYERKDREMLIKGVSELLQTQAEMFIF-------


General information:
TITO was launched using:
RESULT:

Template: 3HAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1330 -89583 -67.36 -300.61
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -67.36
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.202

(partial model without unconserved sides chains):
PDB file : Tito_3HAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ham-query.scw
PDB file : Tito_Scwrl_3HAM.pdb: