Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKPRFTLAEAKAMARDEFHV----------RVAAIVELN-SYDDQNYKVTAENGAVYVLKVHNGVES-------RDEGLLDAQSQLYERLRRK-GVAAPYPVDSNPLADGDATFALRLLEWVDG-DL-LSSKE----ITPGLLATTGAFLGRIRLALDDFDHAALH---RVHLWD-GRQFPAL------------ASFADGLVDAGCDV---D--KAADVHRAIANFDAVVAPAAAQLPLATLHGDFNDANVLVGAETLGVLDIGDSVHSWRVNDVAVGMAYVVV
2PYW Chain:A ((8-276))---PLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD------RTMALIGMRYLEPPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTEQVVFSDPYRVSTFNRWT-SPYLDDDAKAVREDSALKLEIAELK----SMFCERAQALIHGDLHTGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLI-


General information:
TITO was launched using:
RESULT:

Template: 2PYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 726 -14504 -19.98 -65.04
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -19.98
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.282

(partial model without unconserved sides chains):
PDB file : Tito_2PYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2pyw-query.scw
PDB file : Tito_Scwrl_2PYW.pdb: