Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAADPTVPYAGLSPERILEALESVGLRPDGRLLALNSYE----NRVYQVGMEESAPLVAKFYRPGRWTREAILEEHRFVQQLADAEIPAVPPLAFAAEFVGQLADDRGSCTL-----------PEYGGFAFAVFPRCPGRVPA--LDQPDTLQWMGRFLGRIHALGTLEPYRHRLTLDIDSFGHAPRDWLLAHDMIP-------PELLPAWRSVVDQALE-AVQACHARAGNVNLLRLHGDCHAGNVLWIDEADAPRYGAG---ALPGPHFVDFDDSCMGPA---------VQDLWMLLSGDRAAMTRQLGD----ILAGYEDFCSFDPRELHLVEALRTLR-LIHYSGWLARRWDDPAFKAAFPWFDTPRYWQDRILELREQVALMQEPPLVA
4OCV Chain:A ((24-378))------------TNEALFDVASHFAL--EGTVDSIEPYGDGHINTTYLVTTDGP---------------------RYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLS-GFDANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTMECGMRFLADYLEGDVYFATKYPEHNLVRSRTQIKLVREMEQRADETRAIVADVMETT---


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1499 -5586 -3.73 -17.85
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -3.73
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.316

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: