Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTIKNDNATAHIILDGRIDSTNAPLAEKQIFEGIHAGTEKVIIDAENLEFISSAGLRVILKLRKTYKNLEIVGVSPEVYDVFEMTGFTEMLNIQKGYRKLSVDGCEVLGEGSNGIVYRYDPE----IVVKVYRNANALNEIERERRLARTALILGIPTAIPFDVVRVGNSYGSVFELLNAKSFSKLILAEPEKKDKYIAEFVDLLKRIHSTEVNPEDMEDM----KAVAGGXKAVAVGWAEFLRDYLPKEQSDKLLSLIRA---VPERHTMIHGDYHTNNVEMQN-GEVLLIDMDTLSYGHPVFELASMFLGFVGFGELDHTVTEKFMKLPYETTLYIWHKSLSLYLGTDDEARMKEVAEKAMVVGYARLMRRTIKRIGFDDPAGKKVIDNCKNHLSELLAKVDTLDF |
1ND4 Chain:A ((24-247)) | --------------------------------------------------------------------------------------------------------WAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHL----APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAE-----------------ELGGEWADRFLVLYGIA----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ND4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) :
2D Compatibility (Sec. Struct. Predict.) :
1D Compatibility (Hydrophobicity) :
QMean score : ?
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