Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDLDKPIAYGRTAEIFAWGE---NQVLKLFHAWV-GFDAVEYEYRIARTMQS-CGLPVPQVGEIIEY----------KGRYGITCQRIKGISMTESLARAPWKILRYARRMAELHARVHAVTHPTDIP--PL--NPK------MARKILQA--QSLPAR----LREKALTRLEK---LPEGHDLCHGDFHPDNILLTP----QGEVILDWMDAGTGNPLADLARTSIILKGSIESGQIRHPLLKRLAHLFHRAYLAQYFSLRPGGESEYALWLPIIAAARLSENISELEGWLVAQAERGLS
6EF6 Chain:A ((50-307))---------NLSENATYLVEDGEHQSILRVHRQDYHQPHEIESELDWLAALRTDSDVTVPTVVPARDGRRVVTVDPADVPRHVVHFEMVGGAEPDEES-LTLDDFQTLGRITASLHEHSQRWTRPAGFGRFSWDWEHCLGDTPRWGRWQDAEGVGASETALLTRAQDLLHRKLEEYGSGPDRYGLIHADLRLANLLVDSSTPQRTITVIDFDDCGFGWYFYDFGTAVSFIEHD-P-----------RLGEWQESWVAGYRSRRELPAADEAMLPSFV-------------------------


General information:
TITO was launched using:
RESULT:

Template: 6EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 887 -11369 -12.82 -52.39
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -12.82
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.283

(partial model without unconserved sides chains):
PDB file : Tito_6EF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6ef6-query.scw
PDB file : Tito_Scwrl_6EF6.pdb: