Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MSRRHMNRFTIEQVLD------IAEVIHSRGSRKVWRI--GDYILKQTP------YEGVNNEVATLRFVQQHTTIPVPVVYDEWLSPDRRFHYILESRIPGKSLKQCW--GVLSRKGRERIARTVLKYMQELSQFRSDRLESISSNKLRLNNFVPKPYKVLL---NIWRTDNDIFDNEYRPALLSSGVDDGVILVLKNTMPPCQ-GQYTLTHGDLFTGNIIVDPVKEQVTGIIDWESAGF----WPAWFQYARITLGAGGWDDEWKALLSRAMKATHLPPHSKHGRIWWDAVYELLDHPGSSLAREWIKEIIRYLAGENVSLNNYDGFGL---------------------------------------------------
2OLC Chain:A ((5-396))KTPLYETLNESSAVALAVKLGLTLTCQEIGDGNLNYVFHIYDRALIIKQAVPYWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMA---VTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEHETKV---IDPEFAFYGPIGFDVGQFIANLFLNALSRDGADREPLYEHVNQVWETFEETFSEAWQKDSLDVYA-NIDGYLTDTLSHIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK


General information:
TITO was launched using:
RESULT:

Template: 2OLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1384 26141 18.89 87.43
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 18.89
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_2OLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2olc-query.scw
PDB file : Tito_Scwrl_2OLC.pdb: