Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRPGGPGRCSIRQRSVACTGAGAQRDVSAARSPVPNPATSAVIPAILADVEEVAVVVAHHDCATLRVGDVFLKVDADQTRTDVEVEAMARAPIPTPRVLWRK----PPVLALAALPGTALGRLGEPSTASSAAWVAAGAAVRKLHDAPLPPWPGRS-RDEITSHLDHECEWLIT----TGVLP---SELVTRNRQVAEAALRPWTPVFTHGDLQTSHVFVDGDEATGVIDWSEAAQGDALFDLATLTLGH------QEHLGDVVAGYGADVDLDVIRAWWSLRSLRAVRWLIEHGFDPSAPGCEIDVLRSQL
1L8T Chain:A ((55-262))-----------------------------------------------------------------------------DVEREKDMMLWLEG-KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDEL---------------------------


General information:
TITO was launched using:
RESULT:

Template: 1L8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 750 1642 2.19 8.64
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 2.19
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.218

(partial model without unconserved sides chains):
PDB file : Tito_1L8T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1l8t-query.scw
PDB file : Tito_Scwrl_1L8T.pdb: