Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHVPLSIHTTSYSMAAWDITTADEAWLIELCHKSADEGRQIGGQEHGGPKVVRIS-----DRIVAKYG-NIR-R---SELAAQEVAYHNTDRSIVHIPKVHRFFESDGQSYLFMEYVEGQTLEDVDFE-------THKDIPIRVANILAHLQQILGDCDSPGPVTGGEAHGYIFGDEGAGTAFDSIEDMNVYMNKRLDKMNEYLSRQEDQRRFDHLDLTPYALVLCHGDICRRNIIFESDGSLCLVDWGFAGFYPRIFELAAISYVVQNNAAFKDPIIHEFTKLLSLTDKEKQDIDRFRAVRFANLRWSFRDRRTTAEEDKFIQELYETQKRIKE-EQETAGIQSFIISELLDGLL--EQKSRPDLEVRHVPRPWTGSQTAIGHVKRVVVVGLDVNVASFILAMKILSSRRIFVIRTTQGSPK
5K00 Chain:A ((16-265))------------------------------------------IGTG--AKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR--HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYV---------------------------------------------------------------------HSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKP------------SL---AYAAPELIQGK----SYLGSEADVWSMGI-----LLYVLMCGFLPFDDDNVMAL----YKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNL-LNHPWIMQD--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5K00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 980 23566 24.05 109.61
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 24.05
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.204

(partial model without unconserved sides chains):
PDB file : Tito_5K00.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5k00-query.scw
PDB file : Tito_Scwrl_5K00.pdb: