Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHGRSRLYRYLKSGRLSAKAGFDRYPDLRVKQLGGSHNVYLVSDHRSHKKCIVKSFAGSGPKSVQHMEKEYKRLRQAGRLVDDRRWVHVARPLCKSNGEGFFAEELVSGKALGDYMRDAMANGRDSELYEKLTMLAGFLALLHKKTERPSHVKPSNIRDELKKHARQASKGGAFAPHELKRIESLVDNVTSNDLISQTRRGLVHGDANPSNFLYDKK-RLNVID---MERSGYRDPVYDLGMLAGELCHYAMKYGGNEYKADPFIGHLYWTYAGNFKDQLGTFIRLTGRNPIYMANSLLRIARHPFFSPEYKRRLARKAYECLKSLKK
3UQC Chain:A ((20-265))-------VQLVPGARIAN----GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI--DKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSP---SPVGAIRAMQSLAAAADAAHRA-------------------------------------------------------GVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE------RDTAGQPIEPADIDRDIPFQISAVAARSV-----QGDGGIRSASTLLNLMQQATA


General information:
TITO was launched using:
RESULT:

Template: 3UQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1427 -86012 -60.27 -355.42
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -60.27
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.305

(partial model without unconserved sides chains):
PDB file : Tito_3UQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3uqc-query.scw
PDB file : Tito_Scwrl_3UQC.pdb: