Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKSPDLPVLPGSDQVAPASAIWSSETWRWEAVRWMDTALARRGLE--RVPTTPLQPRVRPWSTVLVAETTDQGRVWFKATSPE-------M-SPEAAILRALRSVTPDAVPVVWADD--------PERGWLLMPD-QGPVLRDVQRDDDAVSLMSSVVRRYARLQRSSTRVVDQLRDAGVPDMS--PRESARRWQRL---------GLKP---DTTREVRR---AAQRLDAVGLPLTIQHDDLHAGNVFADGTSAGAHDARIFDWGDASVGNPLCSLLVPLERIGEGLDDD----AARAARERILRAYLSVWSDVVSSTALSAAVDDALLIARVGRVFTWQRALTRASADERHAWGVHGRRLIAEINRSLGHAPEPSHD
4OCV Chain:A ((24-298))-------------------------------TNEALFDVASHFALEGTVDS--IEPYGDGHINTTYLVT-TDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQG-KETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLV---PNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATT--GKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVG-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 922 -13238 -14.36 -56.33
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -14.36
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.333

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: