Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGLRKTYAKPYSRGISSPLEALRISPVVLSALKGLLSPDTLSRLTPL-GGFEARVYTD---G-----------ERVYKVYQPGEA--HLAALEAERM---ARAGLGSFVLGVAQVEGQGILVIRHFPGKPFSPESF-TPKALAALSHLFLSLHRLPEPGYV-ERE----ELSERLERFAESLGSVP-------EAL---SLIKALMREVTW-----VAGVEKRFCHRDAWAGNLLLKTQENPSHDDPEVLLVDWVRSGGDDPARDLALLKTGS-LDLL-----------GEKRAREALFRLVQFYPK-E-------------VRERLAFYVPLTYLHDLHWFRTKKP------E-GFLEALADKLPRALSFFQDCFPLRNRAC
3C5I Chain:D ((34-355))---------------------------------------DNLRVKQIL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNK--------CLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTKSYNEFDFFLYAEQRLKMYDDQ------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 867 -24703 -28.49 -101.24
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain D : 0.60

3D Compatibility (PKB) : -28.49
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.349

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: