Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANPLDHKIKEYLRKLDPTILDIDNI-------QSISTHKIGLGESNLNYLAIING---------KKFNIRINMYPHFP--KKSENEFNSLKIVEPLGITPKVFHYEASKEILGETFIILEYLDGRSLNKYKKIGGDVIRKLGVAVAQLHNTNINNIENRLKRHGSSKMDLLNIIKQMIEYI-NRKRKHYFPIRGVFENVLEKSYKHLQRLNFPIKPSYVLGHGDIDPSNVISSQ-------RKLKLIDWEDLGLMDPALEIVGLFDSFDL------------------SNKEKELFLKGYLEVRED--------------TSLKKKLPIFLPFQIFRVFCWAIMHIYELGEGETNEVFLKEQDLKEHIDYTEKMFTKCKKAEIIDKDVRWNISEIVPEHYLKLTT
5FUT Chain:A ((4-347))-------PEPRTRRRAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG-----GAEAMVLESVMFAILAERSLGPKLYGIFPQ-------GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEP-KWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLE----STPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIV-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 981 5337 5.44 20.29
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 5.44
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.314

(partial model without unconserved sides chains):
PDB file : Tito_5FUT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5fut-query.scw
PDB file : Tito_Scwrl_5FUT.pdb: