Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQIVEDAGSLDVFRWPSSSPPSPENLEHAARLCQGALGSTS----VAVVATPYNHAGWSAQDCIKVSFPS--------ENRSFIAKVPRLVDENSATACKNEAQRASWASQHQIGPAVIAIDDLSGAFAMEFLSGQTLSAQMMLQDHLKTCTIGLLRRIHDAPSQHY----MQ----IYNAPAAVKRMLQAADKERLLDGDDGLLLESLITWTFQKVGC---QPTFQTLVPCHNDFHSQNIMLDQQGTLWAIDFEDCDLGDPMWDLGYLTANMGL------------------EPL--D-LAGIY-GCNM----------EQ-KKRLEVFYYLAIGHCAVWSAIHGPLW-----TQHYRDCMLRLRRGWLRL
3C5I Chain:D ((11-354))-----------------------LTDPLYIKKICLEKVPEWNHFTEDNLRVKQIL---LT-NQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELY-NTISEFEVYKTMSKYKIAPQLLNTFN--GGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTN-KCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTKSYNEFDFFLYAEQRLKMYDD--


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1104 -23756 -21.52 -85.15
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.62

3D Compatibility (PKB) : -21.52
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.240

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: