Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERIKINSITIDEAKKH----AVFVVKKELCCNVNKVQYLGGGSFG----YIYKVDIDRPPYTVVMKACRCDNMCEREAFELNLLAKDSLIQIPKVYFTYLKDDIVSIDYICMEYVEGKD-------CFTDFSKLFLSKAKKRAFADKITSAMYAWHSKTNDKFGLVQNANYDEWLDYYKPFAFDILQKARNMVDRGELESYFLKVMELAWNNFDYIFSEKVEHASLIHGDLNVMNILADDKLNPIAIIDPLESKWADREYDL------FQLKNLTGNAFGL--------YEMYKSKYPTSKNCDLK----VAFYAMFHEIYCYIRSGRRTKI-------NHLRCLLNLKIELNNVSIHS-
3ATS Chain:A ((1-357))TLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP-TYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDT--TLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAA-----REPVLLWGDARVGNVLYRDF-QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVELGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH


General information:
TITO was launched using:
RESULT:

Template: 3ATS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1487 -13529 -9.10 -43.50
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -9.10
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.267

(partial model without unconserved sides chains):
PDB file : Tito_3ATS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ats-query.scw
PDB file : Tito_Scwrl_3ATS.pdb: