Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPFRSNNPITRDELLSRFFPQF--HPVTTFNSGLSGGSFLIEHQ-GQRFVVRQPHDPDAPQSAFLRQYRALSQLP-ACI---APKPHLY-----LRDWMVVDYLPGEVK-------------TYLPDTNELAGLLYYLHQQPRFGWR-IT-----LLPLLELYWQQSDPAR-RTVGWLRMLKRLRKAR---EPRPLRLSPLHMDVHAGNLVHSV-SG-LKLIDWEYAGDGDIALELAAVWVENT-EQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ
5UXA Chain:A ((2-298))--SKDIKQVI--EIAKKHNLFLKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRREDV-MPRTKVEKQALDLVNKYAISFQAPNWIIYTEELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTPEEARMSMKQRMDAVRAKFGVGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAFGEEGLEALILAYKEIGGYYWPKMKEHIIELNAAYPVSIAEFAL----VSGIEEYEQMAKEALE------


General information:
TITO was launched using:
RESULT:

Template: 5UXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1078 9178 8.51 35.43
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 8.51
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.357

(partial model without unconserved sides chains):
PDB file : Tito_5UXA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxa-query.scw
PDB file : Tito_Scwrl_5UXA.pdb: