Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVEVNSEETVPEVLLLDLGGITFPSPIGPLLAAAESIRDPGLPRRMVSSVLWKELECGFLTIPEFCEQFAKGKAVVQEALIGWFEGLRAMEPSPRMIILLSELRLKYPGLKIGAVTNNFKHPAPLRP---MRDLRGELLFDTIVESAVEGMAKGHPGGERWALVEVWNFHDGSYMEAHIIWSSVRLFKTALERLDYHGPASAVLYLDDLKHNLAQPASLGIRTRHAITPEEATETIRKMLALDVSSGSPLQKYLASLGVLPDSISDQARPFAWQFSFGQSNPTYLV--GLIPEKPLEGYTLQKLLEEKCAVL-------RKQPPGELLPSAHDVVREYTVMSELGKEGCVP------------------------VPRTLGLCTDKTICGAAFYVMRFVTGVVFTDPNLPNLQPYQRRKVYEDLMKTAAAVHNFPWHRSEALTQRFRGDPSKYVSKQVERWS-TQGIDVEGFKRLAKGLLDN-VKISQKSPEFQSLVHGDFRLDNCIYDPHTFEVVAVLDWELSTTGNSLVDIASALSQYYGLYPGIAQLSSN-FEELG----IPKERELLDLYLRYREVESIPEGLMQYMEAFQCLRMAGILYGVLMRTKKGNASQQHQQAKGGSIFSMAYVTKLCTRGLELLQSRACSSSPIAVDAPSKL
1EK1 Chain:A ((4-544))------------RVAAFDLDGVL-------------ALPSIG---------PTEQLMKGKITFSQWV------------PLQIFSQAMAARSINRPMLQAAIALKKK--GFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEP----------------------------QIYNFLLDTLKA--KPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKVTGTQFPEAPL-PVPCNPNDVSHGYVTVKPGIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEI--EEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRTFKSFFRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGFRGPLNWYRNTERNWKWSCKG----LGRKILVPALMVTAEK-------DIVLRPEMSKNMEKWIPFLKRGHIEDCGHWTQIEKPTEVNQILIKWLQTE---------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1EK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2311 949 0.41 2.12
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 0.41
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.144

(partial model without unconserved sides chains):
PDB file : Tito_1EK1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ek1-query.scw
PDB file : Tito_Scwrl_1EK1.pdb: