Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRDAHERLTERFEDYRIVRKLRRVPPHEVYEASVDSRRAVYKGDTGPTGNAAVEGRVTALVGRETAVPVPETLRVGDDCYVTAWHPDAPAPDSSDEADEAWAAAAGRGLATLHTETEPLVDGCGPFRAADGGVRVETADDWHAAAVDHVRHRRSVLAEYGHADVADAAVEFLRDRPDAFDGAGDPVCCHGWWTPEHVAVEDGRVACVVDFEHATAAPGEWDYWRTVTPTFAACDEDTTAARRAFRRGYESVRPFSPGFERRRPYYGLLNGVYYLQSLYVQDRHGPAATAERAARFRARIFETISELDRGRLGRTAHPSRRVAFARHTPTSVMSRFDAVLFDLDGTLCENEQDVEHLYFGAFERAEVEPFGAPSDLWAVLEGPPTTPDEFEYYREGFRTVAAEHGRAEADVSAVAREFVDGIDYGAVSLLGGAEAALADAGVGHRVGLMTNGPEYRQSVKLEALGLEDAF-EVVVYAGDMERRKPHTDPFDRAVEALGVDASA-TLY-VGNSLKYDVAGAREAGLPVAWYPDGDADPGSYDPDYVVESLAELADVLDGTVE-
3M9L Chain:A ((2-201))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLSEIKHWVFDMDGTLTIAVHD-----FAAIREAL--SIPAEDDILTHLAALP----------------ADESAAKHAWLLEHERDLAQG----SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMV--MVGDY-RFDLDCGRAAGTRTVLVNLPD-NPWPELTDWHARDCAQLRDLLSAEGHH


General information:
TITO was launched using:
RESULT:

Template: 3M9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 947 -39011 -41.19 -199.03
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -41.19
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.168

(partial model without unconserved sides chains):
PDB file : Tito_3M9L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3m9l-query.scw
PDB file : Tito_Scwrl_3M9L.pdb: