Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESTDEPGDTVDTELFTRVVRHGLPDVTVETVTPGGPSWNPVTEVARVGFADRDPVYCKAAPGDH-EGDLRAEAGTLDYVGAT-LRVRVPSVVRVTTEPVAALLTEPVAGRAVADEWFET--------TPERRATLAERLGRTLATVHTERFDRAGEITGGDPDGLALDHAPWPEVLRAGVTETQRRAPTDRFDPECARLLDAIDDSRDRLADPPARLLHRDPATPNCFDTGD-DRLTLLDWGNSVVGDPVCDLVRAREQVLAPSREPAPDRLVAPLRRGYRAVAGGVPSAADREPVYEAAITLSTAGFVDRLAEWREESVAELTAWFRAELDGRLSAVE
5UXA Chain:A ((4-257))-----------DIKQVIEIAKKHNLFLKEETIQFN--ESGLDFQAVFAQDNNGIDWVLRLPRREDVMPRTKVEKQALDLVNKYAISFQAPNWIIYT---EELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLV-----VHTPEEARMSMKQRMDAVRAKFG--VGENLWNRWQAWLNDDD--MWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAF--------GEEGLEALILAYKEIGGY-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 972 -495 -0.51 -2.03
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -0.51
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.235

(partial model without unconserved sides chains):
PDB file : Tito_5UXA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxa-query.scw
PDB file : Tito_Scwrl_5UXA.pdb: