Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAHVPSGPDELTPEWLSRALGAEVTSVSWERVGSGQIGACYRLTLKGEEKVPARLVAKMASEDPTTRAF-LASAYRTEVLFYRDVVPTVAVR---TPRCHYQAIADDNSAFVLLL------EDMAPAEQGDQLAGCTPQQAAAAVTNLAGLHGPRWCDKTLTEIPWLSVVTEDDAAVLTEVFAPAVDAFVQRFTGRLSDEDIDTLRRVADRIAAWAVARPERFGLVHGDYRLDNL------LFAPPPQQTVTAVDW----QTLSIGHPVRDLSFF-LGTAMDPAERSAHERALVETYH-----TALTGYGVDDYDLQSCWEDYRFGALQGPLITVLGCAVGTPTERGD---RMFLAMTRRSCAAIRELGSLELI-
5CXB Chain:B ((1-369))------PSPDELKPF-------PTVQQTIF----RGHEGRVRSVAID-----PTGVALATGGDDGTVRVWELLTGRQVWSVKLNGDEAVNTVRWRPTKDTFILAAAAGEDIFLMIPTHPSVTPALDQASRDILNAGFPPGKWARPGTRLED-EGVLLRITVRSTIKAISWHRRGDHFATVSPSGQRSSVAIHTLSKHLTQIPFRKLNGLAQTASFHPL-RPLFFVATQRSIRCYDLQKLELVKIVQPGAKWISSFDVHPGGDNLVVGSYDKRLLWHDLDLSNRPYKTMRFHTEAIRAVRFHKGGLPLFADASDDGSLQIFHGKVPNDQLENPTIVPVKMLKGHKVVNKLGVLDIDWHPREPWCVSAGADGTARLWM


General information:
TITO was launched using:
RESULT:

Template: 5CXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1815 8797 4.85 27.32
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : 4.85
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.134

(partial model without unconserved sides chains):
PDB file : Tito_5CXB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5cxb-query.scw
PDB file : Tito_Scwrl_5CXB.pdb: