Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------MNEIKLGKKISEGKTVDVYES----GDLAVKVFKPDAPKT--VVFYEAFMDSKVEETGLNVPKIKEVELIDGKWAIATELIKGKTLAQIMQEEPENCDGYLDDMVELQLSIHAKKVTG------ISKLKDKLREEIES------LDVIDHI----KRYDLLTRLDSTP--KHVKLCHGNFGPENIVVTDDNKVYIVDWIGASAGNASADVAKTYLKLALT--STETAEKYLNLFCKKTNTAKTYVQEWLPIMAASTLAKGVTSKEEKDLLFTWLDVVDYS
1J7L Chain:A ((2-264))AKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWL-EGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE-YEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLL--GIKPDWEKIKYYILLDELF-------------------------


General information:
TITO was launched using:
RESULT:

Template: 1J7L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1012 81665 80.70 362.95
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 80.70
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_1J7L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1j7l-query.scw
PDB file : Tito_Scwrl_1J7L.pdb: