Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEAYFLQGILLMKKTLIALLSLLFSVDTLISASIIDPDVYTILEQSFPSIPK---EQWMIQVLKGGLSGTALYKIETPT----------QQYVLRLHQSTQ-LSSQDEREHFALIEAAKLGIAPHVAYVSSDNRAILMEFVNHKTLTLEKAKLPENIVKIACAIRKAHEIVGHPHVGE------SLLSNAHRCHEKVLKDGL---GTEE--NING----ALELIKRYREQLSAYACPQVNVHGDLNPRNIFLTDDNGVLLIDWAESSLEDPFYDLTYFALKHDY------------------DEVQEALLLKTYLQRQP-----T----VEETSRFTLQKKIHQAFWSLTNLYLADVQLRKHPQQKIDPQASLKSWSTYQKTYADSMEELPAQYFYELSRLNYQLAL
3C5I Chain:D ((14-360))-----------------------------------PLYIKKICLEKVPEWNHFTEDNLRVKQIL--LTN-QLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFN--GGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSK-SDNLANTIVFCHNDLQENNIINTN-KCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTKS-YNE--FD-------FFLYAEQRLKMYDDQKEYLI------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1126 23965 21.28 83.50
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain D : 0.63

3D Compatibility (PKB) : 21.28
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.380

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: