Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSGGNMAEKDLATRVARVLGRNSVRLEDLPPGSSRGAARVLSEEGEPIAFLRIDLGVATDVTVGKALVSEMALVKRAHDLGFPVPKVFALLNDP--PVAVMELAAGTARPDEA-EAERVGPEFMGHIARLHSIAPAEFGLDAPATVSDAIRQDLDCYMADAEA---RGIT-RRPLVRLAARILRHALPRSAEPPAMLHGDVGAGNFMVDNGRVSAILDWELAHAGDIHEDLAWLWTRGAH-TAFGDPRQRIAEYEAAAGKALDPDRLAWHVAFVTFKSVIGLQRRMYAQGDDPGLLIILIAILTYETLLCAALGRILGIQLDMMEEAPVEGVTETVRLIELMRHVAPPANREGELLQQYLRAEAAQRPWNADRLRADARERLGAHPDQLDMLVDSAAPDRFADLLRVFGAAAGRRCKAFPNAERRVRRALAIGLGKQN 1ND4 Chain:A ((10-263)) --------GSPAAWVERLFGYD--WAQQTIGCSDAAVFRLSAQG-RPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQ--AKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPD-GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWADRFLVLYGIA-A--PDSQRIAFYRLLDEF------------------------------------------------------------------------------------------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 1ND4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1149 -19841 -17.27 -80.65 target 2D structure prediction score : 0.65 Monomeric hydrophicity matching model chain A : 0.62 3D Compatibility (PKB) : -17.27 2D Compatibility (Sec. Struct. Predict.) : 0.65 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.242

(partial model without unconserved sides chains): PDB file : Tito_1ND4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1nd4-query.scw PDB file : Tito_Scwrl_1ND4.pdb: