Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQQSFYENTVPIAISQLRNDRQIPTLCQYFDGGQCRVFKVTFTD-GESWAVRVPLFVRHASQNTVIQLLESEARILRELEVKEFSWAARLRGCSFTFDNAIRYPFIALTWIPGSQLLWSDDFPTRPLRDKILDQVATMHISLIECSKEARGSSLKHFTRIIQNKTRRVREGLLPEITEQDCSDQMNILPNVL--LPELDEAPFAITHGDISPQNILIDAHHNVTGIIDWGFSSRVPFQQ---AACF------PRFLQLQNIDLWPNSTLQKDRETYITSVRCRAPLEVSSMMIQVLSSENADFQHCFLESIISKGMHRRLARNGWGVSS--CGQGSEGEAND--RNL------------------------
1PHK Chain:? ((15-291))-----FYENYEPK--------EILGR------GVSSVVRRCIHKPTCKEYAVKIID-VTGGGSFSAEEVQELREATLKEVDILRKV---------------SGHPNII-------QLKDTYETNTF------------FFL-VFDL---MKKGE--LFDYLTEK-------VTL---SEKETRKIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND----NHPGYGKEVDM---------WSTGVIMYTLLAGSPPFWH---RK--QMLMLRMIMSGNYQFGSPEWDDYSD-TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV


General information:
TITO was launched using:
RESULT:

Template: 1PHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1076 -14981 -13.92 -63.21
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -13.92
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_1PHK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1phk-query.scw
PDB file : Tito_Scwrl_1PHK.pdb: