Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHGRSRLYRY-LKSGRLSAKAGFDRYPDLRVKQLGGSHNVYLVSDHRSHK-KCIVKSFAGSGPKSVQHMEKEYKR-LRQAGRLVDDRR-WVHVARPLCKSNGEGFFA-EELVSGKALGDYMRDAMANG-RDSELYEKLTMLA-GFLALL-HKKTERPSHVKP-----SNIRDELKKHARQASKGGAFAPHEL-KRI-ESLVDNVTSNDLISQTRRGLVHGDANPSNF-LYDKKR--LNVIDMERSGYRDP-VYDLGMLAGELCHYA-MKYGGNEYKADPFIGHLYWTYAGNFKDQLGTFIRLTGRNP-----IYMANS-LLRIARHPFF---------SPEYKRRLARK-------AYECLKSLKK
3DXP Chain:A ((20-359))RFDTEALEAWMRQHVE-----GFAGPLSVEQFKGQSNPTFKLVTPGQTYVMR-----------AKPGAIEREYRVMDALAGTDVPVAKMYALCEDE--SVIGRAFYIMEFVS-----GRVLWDQSLPGMSPAE--RTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA-MDSLMDWLPQHIPQED---ADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMG--------DFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPITGDWNFYLAFSMFRIAGILQGIMKRVVDGTASSAQALDAGKRARPMAEMGWEYAKKAKQ


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1305 50624 38.79 176.39
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 38.79
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: