Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTETLTKELAVTKALE-LPFWKA----PSNAEILGGGITNFNVKITDEG----------RTYVVRLGEDIVEHGVMRFNELSACRAAHAAGVAPAVRYFQKGALVQDYIPADPLVEEEIQQLKMLELIAALLGKVHRDATQLIRGPVL--AFWVFHILRDYTETLRLLD------SDHI---SKLDDLMQKAQKLEA-AVGNVHLVLCHNDLLPANILNENGRLWLVDWEYAGMNSPLFDLGGLATNAGL------------------SEGLQKLLLETYFDTPV-----S----DELWERYNAMKCASLLRESMWSMVSEQTS--KIQFDYADYTRENLLRFERAFAELQLK
3C5I Chain:D ((12-358))----TDPLYIKKICLEKVPEWNHFTEDNLRVKQIL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFNGGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTKSYNEFDFFLYAEQRLKMYDDQKEY----


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1117 -13511 -12.10 -47.08
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.68

3D Compatibility (PKB) : -12.10
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: