Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MPRPGGPGRCSIRQRSVACTGAGAQRDVSAARSPVPNPATSAVIPAILADVEEVAVVVAHHDCATLRVGDVFLKVDADQTRTDVEVEAMARA-PIPTPRVLWRK---------PPVLALAALPGTALGRLGEPSTASSAAWVAAGAAVRKLHDAPLPPWPGRS-----RDEITSHLDHECEWLITTGVLPSELVTRNRQVAEAAL-RPWTPVFTHGDLQTSHVFVDG-DEATGVIDWSEAAQGDALFDLATLTLGH-QEHLGDVVAGYGA--DV----DLDVIRAWWSLRSLRAVRWLIEHGFDPSAPGCEIDVLRSQL 5IGH Chain:A ((47-283)) -------------------------------------------------------------RRWVLRIPRRAE-VSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVV-PQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREFVVNDKRLHRWQRWLDDDSSWPDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVFGEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFALD-------------------

General information: TITO was launched using: RESULT: Template: 5IGH.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 848 7718 9.10 36.23 target 2D structure prediction score : 0.64 Monomeric hydrophicity matching model chain A : 0.63 3D Compatibility (PKB) : 9.10 2D Compatibility (Sec. Struct. Predict.) : 0.64 1D Compatibility (Hydrophobicity) : 0.63 QMean score : 0.265

(partial model without unconserved sides chains): PDB file : Tito_5IGH.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5igh-query.scw PDB file : Tito_Scwrl_5IGH.pdb: