Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MVRIPDELNAQRRLGPDWENWLDRLPRLCDEIVSDWGLTVVGEPTNGFASIVIPVSTSDGDAMLKVGFDSSPETEHEHLALTYWAGDGAV-----TMFRADPAR---HAMLLEQLHSR----------------DLSQEWDLQACEIVAGFYSRLHRPAPPRL----------RPLTGFVDRWLGALEADAREMPVPRRLIDHALNRGRAFVDDPASVGRIIHGDLHYENVLAADREPWLVIDPQPMS-GDPHYELAPMLWNRWDEMDGYLRE---------SIQRRFYTLVEAAGLDDDRARDWVIVRMILNAHWAVEDAKRMNRALDADERDWITRCIAVAKAVQR------
3ATS Chain:A ((1-357))TLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPV--FPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWP--DDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVELGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH


General information:
TITO was launched using:
RESULT:

Template: 3ATS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1371 -18581 -13.55 -61.94
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -13.55
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.297

(partial model without unconserved sides chains):
PDB file : Tito_3ATS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ats-query.scw
PDB file : Tito_Scwrl_3ATS.pdb: