Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVEVNSEETVPEVLLLDLGGITFPSPIGPLLAAAESIRDPGLPRRMVSSVLWKELECGFLTIPEFCEQFAKGKAVVQEALIGWFEGLRAMEPSPRMIILLSELRLKYPGLKIGAVTNNFKHPAPLRPMRDLRGELLFDTIVESAVEGMAKGHPGGERWALVEVWNFHDGSYMEAHIIWSSVRLFKTALERLD---YHGPASAVLYLDDLKHNLAQPASLGIRTRHAITPEEATETIRKMLALDVSSGSPLQKYLASLGVLPDSISDQARPFAWQFSFGQSNPTYLVGLIPEKPLEGYTLQKLLEEKCAVLRKQPPGELLPSAHDVVREYTVMSELGKEGCVPVPRTLGLCTDKTICGAAFYVMRFVTGVVFTDPNLPNLQPYQRRKVYEDLMKTAAAVHNFPWHRSEALTQRFRGDPSKYVSKQVERWSTQGIDVE-----------------GFKRLAKGLLDNVKISQKSPEFQSLVHGDFRLDNCIYDPHTFEVVAVLDWELSTTGNSLVDIASALSQYYGLYPGIAQLSSNFEELGIPK---ERELLDLYLRYREV---ESIPEGLMQYMEAFQCLRMAGILYGVLMRTKKGNASQQHQQAKGGSIFSMAYVTKLCTRGLELLQSRACSSSPIAVDAPSKL
1NW1 Chain:A ((32-426))---------------------------------------------------------------------------------------------------------------------------------------------------------------GMKELLSTMDLDTDANTIPELKERAHMLCARFLGGAWKTVPLEH-------------------------------------------------------------------LRISRIKGGMSNMLFLCRLSEVYPPIR------NEPNKVLLRVYFNPE---TESHLVAESVIFTLLSERHL--GPKLYGIFSG-------GRLEEYIPSRPLSCHEISL------AHMSTKIAKRVAKVHQLEV---------PIWKEPDYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKRLV----LIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKH----KQLLKNLA--------------


General information:
TITO was launched using:
RESULT:

Template: 1NW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1595 -27766 -17.41 -81.91
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -17.41
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.169

(partial model without unconserved sides chains):
PDB file : Tito_1NW1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1nw1-query.scw
PDB file : Tito_Scwrl_1NW1.pdb: