Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------MNSYAHLNHYISP------SAEAGLSDAWRRSLGRLGDYSAILIRSLNLRPLEVSLHDQTEEHILVRIRLPGSYLILRVAPEDDLAAYVY-----QIRTLNGHNIPAPQIIQRDLS-RSLVPFAFTLESYVPGVTAIELQSAPLLRGAGRQAGRALRRMHRIPVTSAGRPTAS--GRWTQQNWRTVLRQIGRRLAAPPADALIFGERE-----QRVVADLLDHPVL--------------ECQQPSLIHGRFSPRAVRCTSSGN-----VHVEALIDPGHY--VG----GDGLYDLAC-----GLCAAYPEPW---------REGL-------LDGYQSAGPLNEAERRRLPLLQLLTNYWEACRLYMHAEPHE------AARSEAIRLMEEQVGLTRLVSV---------------------------------
4C2E Chain:A ((44-478))ADSERDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLD-SSFEGIGAEVGMEDGKIIIVSPFKKSPAEKAGLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKK---QLSFRIKRAEIPLETVFASEKKVQGHSVGYIAISTFSEHTTEDFAKALRELEKK----EIEGLVIDVRGNPGGYIQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKAYPVNVITDKGSAAASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGSNIKLTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNEDVKHAQVLLKGLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGIIDTRTAETLNQQIEKKKSDEKNDLQLQTALKSLF


General information:
TITO was launched using:
RESULT:

Template: 4C2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1577 70822 44.91 219.26
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 44.91
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.187

(partial model without unconserved sides chains):
PDB file : Tito_4C2E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4c2e-query.scw
PDB file : Tito_Scwrl_4C2E.pdb: