Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDTRQALEKDVRDNLLLLYDFDK-DYDVKLLK-YSENVIFKITFKEAFPVVLRIHRPGYHNIEELEGEILWMDEIHRDTDVELPVVYRGRDGRFLQKMTTFSGEEVYVSVISFLEGSPLGELKD----------DELIKGLESLGEITAKLHMQSINRDKSVVIKRFYWDINNLFGDNNDGIWGSWRDYKALTKEQYRILEKCTSVMKDKLNYYGRSNEKFGLIHADLHFYNVINNNG-VNQIIDFDDSGYGFYMYDMGCALVTYSRNLTKLEGAWVRGYEKVKKLSDEDKKFIPMFVLLRRITRLAWLATHSDSDTAKTVDDEYLDVTIDMAKEWLKANTKVAVITGAAGGIGYGIAKKFLESCK
5UXD Chain:A ((5-254))-------EDLDALLDLAARHGLDLDGGTLRTEEIGLDFRVAFARAHDGGDWVLRLPRRPDV-LERAAVEGRLLAMLAPHLDVAVPDWRIST---------------SELIAYPLLPGSPGLTVAADGEVSWHVDMAS-TVYARSLGSVVAQLHAVDAEAAAATGIE--VRSPAQVR-----GAWRQDLAR-VGA-E-FEIAPALRERWEAWLADDGCWPGHSVLTHGELYPAHTLVEDERITAVLDWTTAAVGDPAKDLMFHQVSA---PSAIFEVALQAYAEGGGR--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 955 -20305 -21.26 -85.67
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -21.26
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.239

(partial model without unconserved sides chains):
PDB file : Tito_5UXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxd-query.scw
PDB file : Tito_Scwrl_5UXD.pdb: