Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIISRKYINEGFNSKAYIIN---DDYILLDGVNQN-SYKNYQKYVNVINQISNVKSLEIPRIIELIEPCEEYPNGALIYKMIKGH-TFRKEHIEIVNLDNIAKKLAEFMDELYEIRVDFDKDEYI----KNELEITEQSVIELKEYLSESNYEKILSWFNEYKNYL--LTFNDYHFIHGDLWYENYILNDNNELVGIVDFEGSGMGDPAYDIAALYY---LGTGFINKVLSYYKYT-DEDLIKRVSMLIKAREIADFDDMVKNYPEEVEEQVDKIKKVL
4R78 Chain:A ((39-277))--VLSVEQL-GGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKD-LGLDVKNYLFDI------EAGIKVNEYIESAITLDSTS-----IKTKFDKIAPILQTIHTSAKELRGEFAPFEEIKKYESLIEE-------QIPYANYESVRNAVFSLEKRLADLG-VDRKSCHIDLVPENFIESPQGRL-YLIDWEYSSMNDPMWDLAALFLESEFTSQEEETFLSHYESDQTPVSHEKIAIYKILQDTIWSLWTVY-----------------


General information:
TITO was launched using:
RESULT:

Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 942 13225 14.04 59.04
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 14.04
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.369

(partial model without unconserved sides chains):
PDB file : Tito_4R78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r78-query.scw
PDB file : Tito_Scwrl_4R78.pdb: