Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQVSEKDVTEAINQLGPE-NHIEEKEDISGHNN-KVFRIKLEERTVICKFCTGE-NSIQDCRKEVNMNQLLKNQTTIDTREILYSNSSTEKTEFPFFITEYIEGE-SLQDSFTELTAEKQVEIIEQAGQILGEVHSKISFQYAGELIPENSNISVNGKTTWIEYITQELTEAVKKAEYTRFSDLTEKAENLVEALSKLEEPERTLVFYDFRPDNVIAESSRIKALIDFERALSGDPFWDYAYSEMSFVEPHQYYNMHEPPDADEEKLRKAFQRGYEKQMELKENWRQNVKLYKLGILIKRFNSFKGWTESAEMTEEEIRRQEKLLKKGFDKLYQSLDIQ
4R78 Chain:A ((20-270))---HMEKIIKEKISSLLSQEEEVLSVEQL-GGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKDL-GLDVKNYLFDIE------AGIKVNEYIESAITLDST-------SIKTKFDKIAPILQTIHTS-AKELRGEFAP------FEEIKKYESLIEEQIP-------YANYESVRNAVFSLEKRLAD-LGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEF--------------TSQEEETFLSHYESDQTPVS--HEKIAIYKILQDTI----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1107 48982 44.25 198.31
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 44.25
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_4R78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r78-query.scw
PDB file : Tito_Scwrl_4R78.pdb: