Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPSHLTHIWRLLKWGRTLARHGALTGIERDPLTPTPVRRLVRVARLGARVPRQPRYADAFQSIGPAAIKLGQTLATRPDLVGEDAANDLLRLQDALPPVPFATIRAQMEQSFGRPLETLYSRFDEAPVGAASIAQVHRAVTTD-GRDVAVKVIRPGVIDQFNRDIQTYEWAAAHVEMLGGEVARLRPRLVIANMKRWTARELDLRREAASASELGEAMEAMPGYRVPAIDWDRTTGKVMTMEWIDGVKISDRDALIA--AGHDVKEIAARLVNAFLRQAIAEGFFHADMHQGNLFVTANG-DIVAIDFGIMGRIDRRARMWLAEILYGLITGNYRRVAEIHFEAQYVPGHHNVEEFATALRAVGEPMRGKPVRELSVGGMLDGLFAITRDFDMQTQPHLLLLQKTMVMVEGVATALDPDINLWETSGPYVKEWLRAELGPEAKAADALIENVRILQRLPGLVKRIEEAFPEKGGAPPPPPLTEVRLIRVGSGWRYMLVALLAGLAGAGAMAAATTFL
4G3F Chain:A ((64-252))-----------------------------------------------------------------------------------------------------------------------------PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------------------------------------------RVEELVACAGLSS-----PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEG-LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCL-------------DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG-------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4G3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 853 -31610 -37.06 -182.71
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -37.06
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.094

(partial model without unconserved sides chains):
PDB file : Tito_4G3F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4g3f-query.scw
PDB file : Tito_Scwrl_4G3F.pdb: