Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSDETHAYWLEAAHALLGDASAEILAGDSEVATLLLTLTDRRQVVMKAVRAASEKRANLFFQWEALMLLSAEPDFPGPQPVSRHSLSDETEVFVLGY-VPGRHPAFESDEDFRVFGATLARFHKISKGKRLSGATNWD-----------------------LHRVARHYENPLLLQL-------LSDQ---ERTIVAAALDRFGPQFQAQIDEGVWTGLVHSDSHRHNVVI-DGARGS-LIDFGECGFGALFWDLG--VAVADSAVDAPERGEVCRQNL-VAGYCTVTPEAEPIVDKTLPV-------FEAMRSLEVITWPV---------------SDWSPERLAGDKEEAR------DNIEVSVRHLEALLDSP-
4QA5 Chain:A ((14-377))----LVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHT-DAYLQHLQKVSQEGD---DDHPDSIEYG---LGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK---VAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDTFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGFNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV


General information:
TITO was launched using:
RESULT:

Template: 4QA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1749 -65387 -37.39 -220.90
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -37.39
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.181

(partial model without unconserved sides chains):
PDB file : Tito_4QA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4qa5-query.scw
PDB file : Tito_Scwrl_4QA5.pdb: