Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGAAHSASEEVRELEGKTGFSSDQIEQLHRRFKQLSGDQP-TIRKENFNNVPDLELNPIRSKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLFHMYDSDSDGRITLEEYRNVVEELLSGNPHIEKESARSIADGAMMEAASVCMGQMEPDQVYEGITFEDFLKIWQGIDIETKMHVRFLNMETMALCH
1M63 Chain:B ((12-167))-----------------SHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGN---------GEVDFKEFIEGVSQF----------SVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN--LKDTQLQQIVDKTIINADKDGDGR---------ISFEEFCAVVGGLDIHKKMVV------------


General information:
TITO was launched using:
RESULT:

Template: 1M63.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 459 -95 -0.21 -0.61
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -0.21
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_1M63.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1m63-query.scw
PDB file : Tito_Scwrl_1M63.pdb: