Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELEPLLDSLAVLAGQEREVTLLPGGLTNANYRV----TTAT-----RDVVVRVASASSGLLSIDRDQEVHNSRAA----------AKAGVAPEVVEHRPGLLVVQFVP------DALTYGD--SDLAANLAGVADVVRRLHEGPA-FAGRFDMFDIQREYLAIMHTHRFRMPRGYLALAP----AAERMEAALRVHPEPRVPCHNDLLAANFL-------QDAQRLWIVDYEYSGMNEASFELGNIVQE------------------AHLTPEHLAELVTAYV-----------GHEDPVRTARAAL----WGIASAWAWTLWGTIQAGASDLDFDFWEWAMDKMDRAAQAFAEPGFDELLDTVGSPR
4DA5 Chain:A ((110-446))----------------EFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLY-----------------AEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKY--LKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQARFD----------------------


General information:
TITO was launched using:
RESULT:

Template: 4DA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 806 -3347 -4.15 -13.94
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -4.15
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.288

(partial model without unconserved sides chains):
PDB file : Tito_4DA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4da5-query.scw
PDB file : Tito_Scwrl_4DA5.pdb: