Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSSAPYNEQVIRDITKILNANFSFPTSITNIELLVKGMNYTLRVECKNTKYYLKIFSASRDKIDISFEMHVINRLSASG-IGVATAINSINGDAYINLTLAGEDRLAVLYAHVGGRTLTSDPRDIFLFS-KALAEIHRTPT---------------SFFLQYTSRIFS-IESEC-----------YRIRSSIEKHSYIPKPLASKLLDNCYSIQALASTDCAVLSHGDAWLGNAKYV-NGVIYFIDLEDSKLANRNFDLGV-MAYNLIVKKYEVRENIQAL-LRGYNELNTSITSGSIKP-YIQ-LRSLFVLCFLLENKLVDQSLLQKVFERAEYFTSSKFDSEMAHLP
2Q83 Chain:A ((11-346))---LSAEDAKKLTELAENVLQGWD-----VQAEKIDVIQALVWKVHTDSGAVCLKRIH--RPEKKALFSIFAQDYLAKKGMN-VPGILPNKKGSLYSKH----GSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPL-LDTTGVWDDETFNVMLNAYESRA-PLTEEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI-


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1243 -22869 -18.40 -76.74
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -18.40
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.320

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: