Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDATDELATLIARGLGVLRPKRLHAGAEAVAYELDD---ARVLKVYHAGGSAERFATIASFYARLNSDRAGFAVPRILTHGVEGGRAYSVEKRLLGEPLSTRAHFLTDTDLIDAYLAAALRVGRIQVEPEWNSWTMFGEQR-HGDWHQHVRGQIESQSRALARMLQPAYWERLANATADVRQHFDRP-F-LGKVCLIHGDFHPGNVLVGAT-GRVLSLVDFGAFTTFGDAAFDVATACGYFS-----MYEPDQATTRRSLVARLLRMEGSPPGALVAMYLKLAAFLTCTAYPDDRVAVQDTGHFQWAMSVLFDPMLDELVDRVPH
4H05 Chain:B ((1-265))MDDALRALRGR-YPGCEW--VVVEDGASGAGVYRLRGGGRELFVKVAALGA-GVGLLGEAERLVWLAEV--GIPVPRVVEGGGDERVAWLVTEAVPGRPASARWPREQRLDVAVALAGLARSLHALDWER---CPFDRSLAVTVPQAARAVAEG----SVDLEDLD-EERK---GWSGERLLAELERTRPADEDLAVCHGDLCPDNVLLDPRTCEVTGLIDVGR-VGRADRHSDLALVLRELAHEEDPWFGPECSAAFLREYG-RGWDGAVS-EEKLAFYRLLDE-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4H05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1172 -28965 -24.71 -114.48
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -24.71
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.267

(partial model without unconserved sides chains):
PDB file : Tito_4H05.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4h05-query.scw
PDB file : Tito_Scwrl_4H05.pdb: