Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVFKNNIALGKSVTEALEILERELGS-------QYCYCKTLEGCSNEVHIIKDVRSG---LPYIM-RFTR-QSRFQNYSLEREILSHVVGRGVATSQAYLFADGIVAACIEGHCVESDKMLGDSPYYELIAKQMRRLHEISVQDDGTSVM---YSETHYGLKSMLDISVDYIGKG-REAELLYKLYSEDGVLGQLVN----------------DH-PSLLWTCISHNDLHSGNIIYSPSAQEVRFIDWEYSTYSINAFDIACFFLEFTGIDCE---------ISAFPCASKRQDFYLYYFGSSSP--------PIDFLCLFFIPLAC---LFWAAWSSGID-GLD--VYTKNRTRLGHATLRKLVNEIWPQCGLTLDKEDCELLELVDFTFQSLYTN
3MES Chain:A ((51-412))-------------TEIIIGICRKNIPGWKEINESYIEVKQIFSGLTNQLFVVSIVN-ELKHPRILFRIYGKHV-KFYDSKVELDVFRYLSNINIAPNIIADFPEGRIEEFIDGEPLTTKQLQL-THICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNIDKELYSKIL---EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLLQTQ--NNIRMIDYEYSAINFAGADIANYFCEYIYDYCSEKQPYFKFKYEDYPCEELRKLFISVYLSQTLQEQVMPSQQIVHIMTKAVEVFTLISHITWGLWSIA--VEFDFTEYANTRFTHYLQKKKELIDQ------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3MES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1134 -14997 -13.22 -51.89
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -13.22
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.308

(partial model without unconserved sides chains):
PDB file : Tito_3MES.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3mes-query.scw
PDB file : Tito_Scwrl_3MES.pdb: