Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSNNNNPLTRDEILSRYFPQ--YRPAVATSQGLSGGSCIIAHD-THRVVLRRHHDPDAPPAHFLRHYRALSQLP-A---SLAPRALFYTPGWMAVEYLHGVVNSA------------------LPDADELAALLYHLHQQPRFGWR-I-----AL---SPLLAQYWSCCDPARRTPFWLRRLKQLQKNG---EPRPLRLAPLHMDVHGDNIVLTS-AGLR-LIDWEYAGDGDIALELAAVWVEDER-QHRQLADAYAARARIDARQLWRQIRLWHPWVIMLKAGWFEYRWRQTGEQQFIRLADETWRQLRMKG
5IWU Chain:A ((2-297))--SKDIKQVI--EIAKKHNLFLKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRRED-VMPRTKVEKQALDLVNKYAISFQAPNWIIYTEELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTPEEARMSMKQRMDAVRAK--FGVGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAFGEEGLEALILAYKEIGGYYWPKMKEHIIELNAAYPVSIAEFAL----VSGIEEYEQMAKEAL-------


General information:
TITO was launched using:
RESULT:

Template: 5IWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1099 6653 6.05 25.99
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 6.05
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.342

(partial model without unconserved sides chains):
PDB file : Tito_5IWU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iwu-query.scw
PDB file : Tito_Scwrl_5IWU.pdb: