Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTRRVELARLRRMAVTALGRYPLA--EGRLIFISH-GENTTFRHIGADGTSHLVRVHRPSRHGRGVDSAAAV-DSELAWLRALREDTDLLVPEPLAARDGASAVAVTEAGETRLCSVLRWMDG-RIHEASPRPVHLHRLGAAMASLHDQADAWTPPDGF-TRIH---WDHEAFFGNVMVYGRT-PAA-ECWTLLPPELRARFREVGARLADLIPGARDSGLIHADLHLGNALFRR--G-AVKLIDFDDCGTGPRSYELAVALWELRGR-----------PDYPAFRQALLSGYRA--RRDIDAT---HLDDFIALRQVAFDLWYTGMAQVNPAFSVRLDGVHQWSLDVLDLVEAG
4OCV Chain:A ((24-319))----------TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTD-GPRYILQRMNTGIFP----DTVNLMRNVELVTSTLKAQ-GKETLDIVRTTSGDTWAEI----DGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTP-HRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLL---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1099 -7633 -6.95 -28.70
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -6.95
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: