Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRRHMNRFTIEQVLDIAEVIHSRGSRKVWRIGDYILK-QTPYEGVNNEVATLRFVQQHTTIPVPVVYDEWLSPDRRFHYILESRIPGKSLKQCWGVLSRKGRE-RIARTVLKYMQELSQFRSDRLESISSNKLRLNNFVPKPYKVLLNIWRT-DNDIFDNEYRPALLSSGVDDGVIL--VLKNTMPPCQGQY-TLTHGDLFTGNIIVDPVKEQVT--GIIDWESAGFWPAWFQYARITLGAG-GWDDEWKAL-LSRAMKATHLPPHSKHGRIWWDAVY----------ELLDHPGSSLAREWIKEIIRYLAGE--NVSLNNYDGFGL----------------
3CSV Chain:A ((4-333))-SREDEIRDFLATHGYADWNRTPRYQRLRSPTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNLDISAP--EIYAEEHARGLLLIEDLGDALFTEVINN--DPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLS-----------------EMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQDARRDVPAQVEAQMIDHYIQATGVDESHFRSAYAVIAVQRNMRILGIFARLSQRFGKRHYIEFVPRVWAHFERGLAHPALASAAEEILNALPAPAPEVLERLRA


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1293 40280 31.15 141.83
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 31.15
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: