Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKAKAERKFKKYFAQGLLALPYGQLIEKIVPVLQAPKDSLEIRQIIDRPFSVIMEVVTDEGRSFFVKVYKLRNPEKQRAELEREFAVSRFWFDKFKDDPEHRVIEPIWLD--------VENLILITRKSEGENLLKLTGRLHLFPAKRVQQRVHRSLSQAGQWLKKFQSFSIVEEVPYVKP----PVELTFSFLQDYILIRLQRMVQN------PKLD----FD-EHFQQKIIDYLKSLWQ----KA-GAQSERLTFAHTDFSLSNILAA-EDKVTVLDFNKCEINSPYKDLSRFYHQLYLLSFKPTFQKSVIEEMKASFLQGYG--APLAKDH-PMFQIFFIIHQVTHLGKISRFWERGLLENVYNHYLVSRVLKDLKQTVLV
2Q83 Chain:A ((20-300))-----------------------TELAENVLQGWDVQAE--KIDVIQ----ALVWKVHT-DSGAVCLKRIHRP-EKKALFSIFAQDYLAK---------KGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELT--------V-------KQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWP--NHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTT------GVWDDETFNVMLNAYESRAPLTEEQKQVMF---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 964 -19460 -20.19 -79.43
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -20.19
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: