Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPDRPEAEIEAMSALFARHLPGLAARSVTRLGEGMDHVAYEADGGLILRMSKEPDPARRADRIRREAALLALVAEI--SPLPVPRVILSDPD--AGVLGYVKLPGRPLAERP-----VAEPGRLAPALGEFLTRLHLAPPERFSALAAPDTQPLTAWLAEAERHHRAVAAHLPAAARRRIEAFLGG--APPAEPRALAFCHNDLGAEHVLAE-GGTVTGVIDWSDAEIADPAYDLGLLYRD----LGPEVTASILAHYAAPWDDAAGRRAVFYARCALLEDLAYGLRTGPRRYAEAALAHLDRTFSAWG
5IQC Chain:A ((7-302))----DNATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKK---KGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTI--DNKQNVLEEY-ILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRT----


General information:
TITO was launched using:
RESULT:

Template: 5IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1251 -24294 -19.42 -86.76
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -19.42
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_5IQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqc-query.scw
PDB file : Tito_Scwrl_5IQC.pdb: